Hi:
thanks a lot for the comments.
I went through the manual on page 26, and I installed miniconda in
/home/albert/install/amber16/lib/python2.7/site-packages/
before I compile Amber and made links at:
/home/albert/install/amber16/miniconda
However, after make install Amber, I still cannot find amber.conda or
amber.jupyter....
Do you have any other idea?
thx again
On 07/30/2016 09:26 AM, Hai Nguyen wrote:
> hi,
>
> you only have amber.jupyter or amber.conda if you let amber install
> miniconda in $AMBERHOME.
>
> Please see Amber16 manual, page 26 (Python in AMBER)
> If you don't have miniconda in $AMBERHOME, just replace `amber.jupyter` by
> `jupyter`.
>
> Per conda, we recommend users to install it to handle Python extension
> (written by C/Fortran, ...).
> Further info:http://conda.pydata.org/docs/intro.html
>
> We make the namespace `amber.pip`, `amber.jupyter` or `amber.conda` to make
> sure that users use the recommended Python distribution.
>
> Let us know if you're not clear so we can make better doc + tutorial.
> thanks.
>
> Hai
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Received on Sat Jul 30 2016 - 01:30:03 PDT
