Dear Prof Case,
Thanks for your reply. There is a file charmmlipid2amber.py, but as per
Amber lipid tutorial we need charmmlipid2amber.csv file for conversion of
lipid residues from charmm to Amber. The tutorial says that this file
should be located in $AMBERHOME/AmberTools/src/etc/charmmlipid2amber
folder.
If this file doesn't come with Amber installation, then please suggest me a
source to get charmmlipid2amber.csv file.
Thanks in advance.
On Mon, Jul 25, 2016 at 5:16 PM, David A Case <david.case.rutgers.edu>
wrote:
> On Mon, Jul 25, 2016, Kshatresh Dutta Dubey wrote:
> >
> > I recently installed Amber 16 and installation finished successfully.
> > However, I didnt find charmmlipid2amber folder in
> > $AMBERHOME/AmberTools/src/etc/.
>
> There is no such folder, but there is a file called
> $AMBERHOME/AmberTools/src/etc/charmmlipid2amber.py
>
> (This is also copied to the $AMBERHOME/bin during installation). Please
> double check the contents of these two folders.
>
> ...hope this helps...dac
>
>
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--
With best regards
************************************************************************************************
Kshatresh Dutta Dubey
Post Doctoral Researcher,
Lise Meitner Center for Computational Quantum Chemistry
Hebrew University of Jerusalem Israel
Jerusalem, Israel
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Received on Mon Jul 25 2016 - 08:30:04 PDT
