Hi, Airy
You can choose to use the ncsu_pmd module, input like this to build two
reaction coordinates:
ncsu_pmd
...
variable
type = DISTANCE
...
end variable
variable
type = TORSION
...
end varible
end ncsu_pmd
Best
Feng Pan
On Wed, Jun 8, 2016 at 12:16 AM, Airy Sanjeev <airy.sanjeev01.gmail.com>
wrote:
> Dear Amber Users,
> I wanted to do umbrella sampling with two degrees of freedom for a
> dimer system. How to proceed?
> One being the distance between the monomeric units in the dimer and
> the other one is angle along the axes between the monomeric units.
>
> Thanks in advance
>
> --
> with best regards,
> Airy Sanjeev
> Research Scholar
> Dept. of MBBT
> Tezpur University
> Napaam,Tezpur-784028
> Sonitpur,Assam
>
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>
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Received on Tue Jun 07 2016 - 22:00:02 PDT
