Re: [AMBER] cpinutil.py problem

From: Elisa Pieri <elisa.pieri90.gmail.com>
Date: Mon, 6 Jun 2016 16:21:43 +0200

Yes, thanks, it worked!

Elisa

On Mon, Jun 6, 2016 at 4:16 PM, Jason Swails <jason.swails.gmail.com> wrote:

> Sorry, this is a bug in cpinutil.py which the test case did not test for.
> You can modify $AMBERHOME/bin/cpinutil.py and change writeParm (on line
> 264) to write_parm, and it should work.
>
> I will release an update for this soon.
>
> Thanks for the report,
> Jason
>
> On Mon, Jun 6, 2016 at 9:46 AM, Elisa Pieri <elisa.pieri90.gmail.com>
> wrote:
>
> > Hi,
> >
> > sorry to bother again, but I'm trying to create the cpin file and the
> parm
> > file with modifications for ASP and GLU as I usually do it and I get this
> > cpinutil error:
> >
> > $ cpinutil.py -p nmr.parm7 -igb 2 -o nmr.cpin -op nmr.modO.parm7
> -resnames
> > AS4 GL4 HIP LYS TYR CYS
> > Traceback (most recent call last):
> > File "/home/elisa/amber16/bin/cpinutil.py", line 294, in <module>
> > main(opt)
> > File "/home/elisa/amber16/bin/cpinutil.py", line 264, in main
> > parm.writeParm(opt.outparm)
> > AttributeError: 'AmberParm' object has no attribute 'writeParm'
> >
> > So I get the cpin but non the modO file. Do you know what is it going on?
> >
> > Elisa
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Jason M. Swails
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Mon Jun 06 2016 - 07:30:03 PDT
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