Hi James!
You don't need an inpcrd file to load trajectories to VMD, you need the
prmtop file.
The command I use for that is:
vmd -parm7 *.prmtop -netcdf trajectory.nc
Have a nice day!
Karolina
2016-05-10 11:24 GMT+02:00 James Starlight <jmsstarlight.gmail.com>:
> Dear Amber users!
>
> I kindly ask to remind me whether is possible to load in vmd both
> netcdf trajectory and amber parm7 or inpcrd file (instead of pdb
> coordinates) to see the visualization of the trajectory "on the fly"
> using one line terminal command? If it possible what flags should be
> provided for VMD there ?
>
> Thanks!
>
> James
>
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Received on Tue May 10 2016 - 03:00:03 PDT
