The 'closest' command has an entry in the Amber 15 manual where all
keywords are explained and an example is given (29.8.4 'closest' on
page 546). Let me know if you have specific questions or encounter
errors.
-Dan
On Tue, Apr 19, 2016 at 2:38 AM, Saman Yousuf ali
<saman.yousufali64.yahoo.com> wrote:
>
> Dear Daniel,
>
> Thank you for your useful suggestion. I found the closest script pasted below,
>
> closest <# to keep> <mask> [noimage] [first | oxygen]
>
> Can you please explain all the terms of this command and tell me how I can you this command according to my case.
>
> Thank you.
>
> Best Regards,
>
> Saman Yousuf Ali
--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Tue Apr 19 2016 - 09:30:04 PDT
