Re: [AMBER] hbond analysis of phosphotyrosine

From: David A Case <david.case.rutgers.edu>
Date: Fri, 15 Apr 2016 07:59:26 -0400

On Fri, Apr 15, 2016, Hai Nguyen wrote:

> > Mask [:PTR.OP1] represents 0 atoms
>
> my wild guess: there is either there is no atom name OP1 or no residue name
> PTR. may be O1P?

This doesn't have to be a "wild guess": use the "desc" command in tleap
to find out what atoms are in the PTR residue. (It is indeed O1P, O2P, O3P).

....dac


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Received on Fri Apr 15 2016 - 05:00:04 PDT
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