Did you run parmchk2 after antechamber? The 'Antechamber and GAFF'
section of the Amber manual (section 15) has a good example of this.
-Dan
On Mon, Apr 11, 2016 at 3:32 AM, Jesmita Dhar <dhar.beauty.gmail.com> wrote:
> Dear sir/madam,
> I am very new to amber. I have checked the mol2 fie, it seems
> correct. I generate parameter file using antechember, but I run tleap
> it will give the follwing error
> Could not find angle parameter: ce - c2 - ce
> Could not find angle parameter: c2 - ce - c2
> Here I am sending the mol2 file and parameter file
> Please guide me
>
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--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Mon Apr 11 2016 - 10:00:04 PDT
