You need to recompile after updating. Just updating is not enough (because
all it changes is source code). So try reconfiguring and recompiling.
HTH,
Jason
On Thu, Mar 17, 2016 at 3:55 PM, Enrique Frio <enrique.frio.gmail.com>
wrote:
> Thanks, sir. The current updates are shown below. I did use the original
> tar file for Amber14, and downloaded Ambertools15 recently. I presume that
> the applied patches below are the latest?
>
> ===========
> [root.localhost amber14]# ./update_amber --update
> Preparing to apply updates... please wait.
> No new updates available for AmberTools 15
> No new updates available for Amber 14
>
> [root.localhost amber14]# ./update_amber --show-applied-patches
> AmberTools 15 Applied Patches:
> ------------------------------
> update.1 (modifies MMPBSA.py, ParmEd, cpptraj)
> update.2 (modifies AmberTools, CUDA)
> update.3 (modifies nab, sff)
> update.4 (modifies Leap, Lipid14, force, field)
> update.5 (modifies ParmEd)
> update.6 (modifies pmemd.cuda)
>
>
> Amber 14 Applied Patches:
> -------------------------
> update.1, update.2, update.3, update.4, update.5, update.6, update.7,
> update.8, update.9, update.10,
> update.11, update.12, update.13
>
> ===========
>
> On Thu, Mar 17, 2016 at 11:02 PM, Ross Walker <ross.rosswalker.co.uk>
> wrote:
>
> > Hi Enrique
> >
> > You did not apply the latest updates - or rather the updates failed to be
> > applied. Try:
> >
> > cd $AMBERHOME
> > ./update_amber --update
> >
> > Then try again. If that does not work then something is messed up your
> > AMBER installation. I would suggest going back to the original tar files
> > and trying again, saying yes to all updated.
> >
> > All the best
> > Ross
> >
> > > On Mar 17, 2016, at 04:02, Enrique Frio <enrique.frio.gmail.com>
> wrote:
> > >
> > > Hello all,
> > >
> > > Amber's current CUDA supported is 7.5, as stated in the main web page,
> > > right?
> > >
> > > I have CUDA Version 7.5.18; single GTX780 (not Ti) GPU.
> > >
> > > Amber 14 and Ambertools 15 seem to be failing in installing:
> > >
> > > ==================================
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > > *./configure -cuda gnuChecking for updates...Checking for available
> > patches
> > > online. This may take a few seconds...Available AmberTools 15
> patches:No
> > > patches availableAvailable Amber 14 patches:No patches
> availableSearching
> > > for python2... Found python2.6: /usr/bin/python2.6Error: Unsupported
> CUDA
> > > version 7.5 detected. AMBER requires CUDA version == 5.0 .or. 5.5
> > > .or. 6.0 .or. 6.5Configure failed due to the errors above!*
> > > ==================================
> > >
> > > Your assistance will be much appreciated. :)
> > >
> > > --
> > > Cheers,
> > > Enrique
> > > <http://www.rbc.org/odb/odb.shtml>
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Cheers,
> Enrique
> <http://www.rbc.org/odb/odb.shtml>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Thu Mar 17 2016 - 16:30:03 PDT
