[AMBER] Query regarding NMR refinement

From: Madhura De <madhurade.yahoo.co.in>
Date: Fri, 4 Mar 2016 10:47:15 +0000 (UTC)

Hello!
I have used Amber14 to run a NMR restrained simulation on a duplex DNA. Since I had incorporated distance restraints by qualitative analysis of the NOE, I need to perform iterative relaxation matrix approach to validate my restrained structure and NOE assignments. Is there any software compatible with Amber14 that I can use to perform the refinement procedure. My prmtop file was generated by xleap.Also, it would be of help if such a software could run on Linux. Insight II NMR refinement softwares do not run on Linux platforms. Madhura


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Mar 04 2016 - 03:00:03 PST
Custom Search