Re: [AMBER] MMPBSA is not performing

From: Asma Abro 28-FBAS/MSBI/F09 <asma.msbi28.iiu.edu.pk>
Date: Tue, 8 Sep 2015 12:21:10 +0500

Thanks for the suggestion.
I am still facing the same situation unfortunately.
Can you please suggest something else?

Best regards,
Asma

On Mon, Sep 7, 2015 at 5:31 PM, Jason Swails <jason.swails.gmail.com> wrote:

> On Mon, Sep 7, 2015 at 1:03 AM, Asma Abro 28-FBAS/MSBI/F09 <
> asma.msbi28.iiu.edu.pk> wrote:
>
> > Hi all,
> >
> > I am trying to perform MMPBSA using Ambertools 12. All the files seem
> okay
> > but no progress is being observed ahead of this:
> >
>
> ​The first suggestion is to try updating to the latest version of
> AmberTools (version 15, freely available on http://ambermd.org) and see if
> you experience the same problems.
>
> AmberTools 12 is now at least 3 years old, and there have been a number of
> improvements released since then.
>
> HTH,
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Tue Sep 08 2015 - 00:30:03 PDT
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