You can use 'strip' command in cpptraj. Search amber15 manual for detail.
Cheers
Hai
> On Jul 3, 2015, at 7:43 PM, Morteza Chehel Amirani <chehelam.ualberta.ca> wrote:
>
> Hi
>
> I'm wondering if you let me know how I can extract the spatial coordinates
> of a specific atom in each step from a trajectory file? Thanks.
>
> Sincerely
> *Morteza Chehel Amirani*
> PhD Candidate
> Department of Mechanical Engineering
> University of Alberta
> 6-29 Mechanical Engineering Building
> Edmonton, Alberta, T6G 2G3
>
> http://www.ualberta.ca/~chehelam/
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Received on Fri Jul 03 2015 - 17:00:04 PDT
