Re: [AMBER] MMGBSA on Protein-DNA/RNA complex

From: Jason Swails <jason.swails.gmail.com>
Date: Wed, 24 Jun 2015 10:46:02 -0400

On Wed, Jun 24, 2015 at 9:21 AM, Vlad Cojocaru <
vlad.cojocaru.mpi-muenster.mpg.de> wrote:

> The default ipb is 2, not 1 ... We did not change this default.
>

​Good catch. It is 2, not 1, and MMPBSA.py does not provide direct control
over this variable.

Thanks,
Jason 

-- 
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Wed Jun 24 2015 - 08:00:02 PDT
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