[AMBER] Regarding the protonation states of Histidine

From: muhammad tahir ayub <tahirgp0.gmail.com>
Date: Thu, 11 Jun 2015 11:50:10 +0500

Today I extracted pdb file from the RCSB protein data bank, No hydrogen's
were present, when the proton were added to the protein through MOE
software, it added the Hydrogen to the epsilon position to all HISTIDINE
residues in pdb file.

How can i come to the true protonation state of the HISTIDINE residue for
my pdb file ( PDB ID : 4KIK )


*Muhammad Tahir*
*Ayub*

*Junior Research Fellow*

*H.E.J Research Institute of Chemistry*
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Jun 11 2015 - 00:00:04 PDT
Custom Search