Re: [AMBER] adp amber parameters

From: David A Case <case.biomaps.rutgers.edu>
Date: Wed, 13 May 2015 13:09:14 -0400

On Wed, May 13, 2015, Carlos Romero wrote:
>
> Therefore I downloaded from
> http://www.pharmacy.manchester.ac.uk/bryce/amber/ the frcmod.phos file
> which contains parameters for ADP and I got the same message.

You need to get both the frcmod file and the prep files, and use those.
Conversions you made from sdf files (or whatever) don't know about Amber atom
types, so they won't be of much use to you.

....dac


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Received on Wed May 13 2015 - 10:30:02 PDT
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