Re: [AMBER] error in amber installation

From: David A Case <case.biomaps.rutgers.edu>
Date: Tue, 28 Apr 2015 08:14:30 -0400

On Tue, Apr 28, 2015, Atila Petrosian wrote:
>
> I am installing amber11 and ambertools1.5 on ubuntu 11.04, using
> http://bgamari.github.io/posts/2011-10-16-amber.html.

This seems pretty pointless. I'd recommend getting the current AmberTools
release (which will be updated to AmberTools15 soon), and installing that
according to the instructions on the Amber web site. If you find that you
need the pmemd program, you can consider getting the current version, or
compiling just pmemd from the Amber11 codes.

>
> In Serial build step, after using make serial, I encountere with
>
> g++ -DHAVE_CONFIG_H -I. -I..
> -I/export/apps/2_ambr/amber11/AmberTools/src/boost-1.38.0 -I/include
> -I../src -I../include -I../src/eigen3b2 -DNDEBUG -DUSE_TINYXML
> -DTIXML_USE_STL -DC99_OK -O2 -fPIC -DHAVE_ZLIB -MT MCPB.o -MD -MP -MF
> .deps/MCPB.Tpo -c -o MCPB.o MCPB.cpp
> MCPB.cpp: In function 'int main(int, char**)':
> MCPB.cpp:2959: error: 'class MTKpp::gaussianParser' has no member named
> 'setnProc'

If you do want to follow the path you have, consider adding the -nomtkpp flag
to configure.

....dac


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Received on Tue Apr 28 2015 - 05:30:03 PDT
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