Re: [AMBER] The force field used in MCPB

From: Pengfei Li <ambermailpengfei.gmail.com>
Date: Tue, 7 Apr 2015 11:14:20 -0400

Hi Wenjuan,

On Apr 7, 2015, at 2:28 AM, wjli <wenjuanli93.gmail.com> wrote:

> Dear Amber members,
>
> Default is the AMBER FF94 model together with the Generalized Amber Force Field (GAFF) in the setting file of MCPB. I want to change it to ff12SB. But it is looking like there is no AMBER paremeters and libraries for ff12SB under AMBERHOME/dat/mtkpp/‍.I need to create these files?Or I just ignore something?
>

Yeah. There is no ff12SB force field support in MCPB. We have developed a python version of MCPB, which is called MCPB.py. It will be released with AmberTools15 in 15th of this month. It uses a optimized workflow and supports ff12SB. The related tutorial will also appear online in this or next week.

Best,
Pengfei

> Look forward to your reply!
> Best wishes.
> wjli‍
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Apr 07 2015 - 08:30:04 PDT
Custom Search