Re: [AMBER] loading molecule in xleap and saving it in mol2 format

From: Hannes Loeffler <>
Date: Fri, 20 Mar 2015 15:15:32 +0000

On Fri, 20 Mar 2015 20:39:50 +0530
jacob wick <> wrote:

> Is nucleic12.lib and loaded force fields like 14SB/bsc0 force fields
> are capable of adding partial charges on modified residues also.

No, these are just libraries with a fixed set of parameters, not program
code that does this kind of computations. If you need to derive your
own parameter set have a look into the manual on how you can approach
this. Chapter 5 in the AMBER14 manual is probably a good place to
start from.

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Received on Fri Mar 20 2015 - 08:30:03 PDT
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