Re: [AMBER] Cofactor parametrization

From: FyD <>
Date: Tue, 03 Mar 2015 10:18:13 +0100

Dear Francesca,

You might be interested in the F-90 REDDB project:

NADP+ (and far more) is included...

regards, Francois

> I am running MD of a protein with NADP+ as cofactor.
> I have some troubles with the cofactor parametrization:
> antechamber is not recognizing the charge of my mol2 file and as
> well pdb file.
> So I decided to dowload the prep and frcmod files from Amber
> parameter database
> but I don't know how to integrate them with my mol2 or pdb file.

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Received on Tue Mar 03 2015 - 01:30:03 PST
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