Dear all,
I am using Chamber to convert .psf files obtained from VMD to Amber .prmrop and .inpcrd files. I am using –xpsf flag for my .psf file as suggested on previous threads.
However I am getting the following error:
<get_atom_parameters>ERROR atom with mass 1 has type alreadydesignated as non-hydrogen type
<get_atom_parameters> atom 8951 1.0080000000000000 H1
Cannot continue
This error has been raised previously also on the mailing list, but has not been solved yet. (
http://archive.ambermd.org/201411/0252.html)
I would appreciate any help on the issue.
Thank You.
Regards,
Saurabh Shukla,
Graduate Research Assistant,
Department of Chemical and Biomolecular Engineering,
University of Illinois at Urbana Champaign, IL
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Received on Tue Feb 24 2015 - 17:30:03 PST
