Re: [AMBER] Problem in generating CCL4 solvent Box

From: David A Case <case.biomaps.rutgers.edu>
Date: Sun, 22 Feb 2015 16:16:54 -0500

On Sun, Feb 22, 2015, pradeep pant wrote:

> >CCL4BOX = loadamberparams ccl4.frcmod
> >loadamberprep ccl4.prepin
> >v = loadpdb target.pdb
> > solvatebox v CCL4BOX 12

You have named the *parameters* CCL4BOX; my guess is that you want to name
the unit in the prepin file (next line down) as CCL4BOX. Give that a try.

....dac


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Received on Sun Feb 22 2015 - 13:30:03 PST
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