[With Ubuntu 14.04 running on AMD64-bit machine, with Python2.7.5 installed]
Folowing
http://jswails.wikidot.com/installing-amber14-and-ambertools14
instructions for building serial AmberTools14 + Amber14 --i.e `configure
gnu`, then `make install` -- the configure phase seems to be successful,
but the make phase, after a whole lot of productive compilation work,
reports the following error:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DHASGZ
-DHASBZ2 -o UnitCell UnitCell.o
/usr/local/lib/amber14/lib/libXtal.a -lm
mv AddToBox ChBox PropPDB UnitCell /usr/local/lib/amber14/bin
make[2]: Leaving directory
`/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src/xtalutil/CPrograms'
#(cd xtalutil/Phenix/ && make no )
(cd parmed && make install)
make[2]: Entering directory
`/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src/parmed'
./setup.sh /usr/local/lib/amber14/bin /usr/bin/python2.7
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "chemistry/amber/readparm.py", line 25, in <module>
from chemistry.amber.amberformat import AmberFormat
File "chemistry/amber/amberformat.py", line 13, in <module>
import datetime
ImportError: No module named datetime
make[2]: *** [install] Error 1
make[2]: Leaving directory
`/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src/parmed'
make[1]: *** [serial] Error 2
make[1]: Leaving directory
`/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src'
make: *** [install] Error 2
bobw.winter: ...lib/amber14 [80]>
Apparently the error stems from some deficiency in my Python
installation. But re-installation of Python 2.7.5 via Synaptic does not
fix the problem. And I haven't a clue how to track down the problem.
Anyone have suggestions?
Thanks,
Bob Wohlhueter
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Received on Sun Feb 15 2015 - 11:30:02 PST
