Re: [AMBER] MMPBSA - standard deviation (again)

From: George Tzotzos <gtzotzos.me.com>
Date: Thu, 12 Feb 2015 12:29:31 -0300

Both total and gas/solv and EEL/EGB

Regards

George

> On 12Feb, 2015, at 11:49 AM, Jason Swails <jason.swails.gmail.com> wrote:
>
>
>> On Feb 12, 2015, at 9:29 AM, George Tzotzos <gtzotzos.me.com> wrote:
>>
>> I conducted a single trajectory MMGBSA calculation. The results are shown below.
>>
>> The MD simulations were carried out for 100ns. The complex, a homodimer, was stable. The STD seems to me to be extremely high.
>
> The standard deviation of what? The total? Or the gas/solv and EEL/EGB?
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
>
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Received on Thu Feb 12 2015 - 08:00:02 PST
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