Re: [AMBER] Fwd: Checking bonds commanded with leap

From: David A Case <>
Date: Mon, 5 Jan 2015 11:19:36 -0500

On Mon, Jan 05, 2015, Francesco Pietra wrote:

> > > I forgot to ask why VMD does not show the existing (according to leap and
> > > bonds between the protein backbone and the active center.

> I loaded parm7/rst7 to VMD

No clue; I've never seen this behavior myself. I guess you should try to
construct as simple a test case a possible that illustrates the problem.


AMBER mailing list
Received on Mon Jan 05 2015 - 08:30:02 PST
Custom Search