Thanks Jason,
Great ! This works nicely ....
Vlad
On 10/30/2014 12:33 PM, Jason Swails wrote:
> On Thu, 2014-10-30 at 10:35 +0100, Vlad Cojocaru wrote:
>> Dear Ambers,
>>
>> Can anybody recommend me a program to visualize the modes and
>> projections created by cpptraj ? VMD used to have a plugin "IED" but
>> this is quite old and doe not work with newest VMD versions ...
> You can actually have cpptraj print out full trajectory files with the
> "modes" command for this purpose.
>
> If you type "help modes" in the cpptraj command interpreter, it will
> give you a list of "trajout" options that let you control how the
> trajectory is printed.
>
> HTH,
> Jason
>
--
Dr. Vlad Cojocaru
Computational Structural Biology Laboratory
Department of Cell and Developmental Biology
Max Planck Institute for Molecular Biomedicine
Röntgenstrasse 20, 48149 Münster, Germany
Tel: +49-251-70365-324; Fax: +49-251-70365-399
Email: vlad.cojocaru[at]mpi-muenster.mpg.de
http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru
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Received on Thu Oct 30 2014 - 07:30:02 PDT
