No. The box is created with a corner at 0,0,0. You could translate it all back, but when you run md, it would get wrapped back into the original box.
Bill
<div>-------- Original message --------</div><div>From: Jonathan Gough <jonathan.d.gough.gmail.com> </div><div>Date:10/08/2014 11:14 AM (GMT-08:00) </div><div>To: AMBER Mailing List <amber.ambermd.org> </div><div>Subject: [AMBER] Is there a way to maintain pdb coordinates into leap? </div><div>
</div>Hi,
Is there a way to maintain the original coordinates from your PDB file
after you have imported your protein into leap and soaked it in a solvent
box?
Thanks,
Jonathan
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Received on Wed Oct 08 2014 - 12:00:03 PDT
