[AMBER] Zn CCCH

From: Fonti Giulia <giulia.fonti.epfl.ch>
Date: Wed, 24 Sep 2014 07:49:55 +0000

Hello!

I'm having problems with the parametrization of a Zn coordinated by 3 Cys and 1 His epsilon. After running T leap i had a residue charge of 0.76... I used Zaff. xml and Zaff.bcl to obtain the parameters , but i noticed that the total charge is not -1 (3 Cys +His+Zn) but 0.77. Could anyone tell me how to solve this problem for my system and where i could find the right parameters for the Zn ( i used Cy2, He1, Zn2 ).

Thank you so much

Giulia
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Sep 24 2014 - 01:00:02 PDT
Custom Search