Re: [AMBER] Converting (rst) file to PDB using ambpdb

From: Bill Ross <>
Date: Tue, 05 Aug 2014 15:18:52 -0700

In particular, the 'rst' file represents the end coordinates and velocities for the run.


<div>-------- Original message --------</div><div>From: Jason Swails <> </div><div>Date:08/05/2014 2:57 PM (GMT-08:00) </div><div>To: menwer momo <>, AMBER Mailing List <> </div><div>Subject: Re: [AMBER] Converting (rst) file to PDB using ambpdb </div><div>
</div>On Tue, Aug 5, 2014 at 4:40 PM, menwer momo <> wrote:

> Hi,
> One can convert the coords file (rst) of a "production" simulation to a
> PDB file to take a look at the structure. Does this structure represent the
> most stable structure obtained in that simulation or what?

‚ÄčNo, it's just a structure in the ensemble like any other.

Jason M. Swails
Rutgers University
Postdoctoral Researcher
AMBER mailing list
AMBER mailing list
Received on Tue Aug 05 2014 - 15:30:02 PDT
Custom Search