Re: [AMBER] questions on output files of hbond analysis

From: David A Case <case.biomaps.rutgers.edu>
Date: Tue, 8 Jul 2014 07:46:32 -0400

On Tue, Jul 08, 2014, zhangmk wrote:

> I think frames number of a hydrogen bond appearance is a fixed value,
> so why it has a average (and std. dev.)

If a given H-bond is present for 10 consecutive frames at one point, and for
20 consecutive frames at another point in the trajectory, it will have an
average lifetime of 15.0 frames.

...dac


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Received on Tue Jul 08 2014 - 05:00:02 PDT
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