Re: [AMBER] MTKPP installation error

From: Kshatresh Dutta Dubey <kshatresh.gmail.com>
Date: Tue, 3 Jun 2014 23:04:09 +0300

Dear Jason,
Thanks for quick reply, I am compiling on gfortran, the output of gfortran
-v is :
 Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.8/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu
4.8.2-19ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.8/README.Bugs
--enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr
--program-suffix=-4.8 --enable-shared --enable-linker-build-id
--libexecdir=/usr/lib --without-included-gettext --enable-threads=posix
--with-gxx-include-dir=/usr/include/c++/4.8 --libdir=/usr/lib --enable-nls
--with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug
--enable-libstdcxx-time=yes --enable-gnu-unique-object --disable-libmudflap
--enable-plugin --with-system-zlib --disable-browser-plugin
--enable-java-awt=gtk --enable-gtk-cairo
--with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre
--enable-java-home
--with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64
--with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64
--with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar
--enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686
--with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic
--enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu
--target=x86_64-linux-gnu
Thread model: posix
gcc version 4.8.2 (Ubuntu 4.8.2-19ubuntu1)

In addition the output of ./configure is also attached.


On Tue, Jun 3, 2014 at 10:52 PM, Jason Swails <jason.swails.gmail.com>
wrote:

>
>
> > On Jun 3, 2014, at 3:47 PM, Kshatresh Dutta Dubey <kshatresh.gmail.com>
> wrote:
> >
> > Dear Users,
> >
> > I am trying to install MTKPP of AmberTool14/Amber14 but it gives
> > several errors during compilation. I have attached the log file for
> 'make'.
> > I am unable to figure out the problem.
> > Please help me to install mtkpp package.
> > Thanks in advance
>
> What compilers are you using (versions are important too).
>
>
> >
> > Regards
> >
> > Kshatresh
> >
> > --
> > With best regards
> >
> ************************************************************************************************
> > <mtkpp-install.log>
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>



-- 
With best regards
************************************************************************************************
Dr. Kshatresh Dutta Dubey
Post Doctoral Researcher,
c/o Prof Sason Shaik,
Hebrew University of Jerusalem, Israel
Jerusalem, Israel



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Received on Tue Jun 03 2014 - 13:30:02 PDT
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