Re: [AMBER] Using MM-PBSA to find binding free energy for Zif 268-DNA complex

From: Jason Swails <jason.swails.gmail.com>
Date: Mon, 02 Jun 2014 08:15:48 -0400

On Mon, 2014-06-02 at 05:02 -0700, Roza M wrote:
> Thank you for your attention.
> I am using Amber9 to calculate the binding free energy by perl script
> mm_pbsa.pl , the error message is : Died
> at /usr/local/amber9/src/mm_pbsa/mm_pbsa_calceneent.pm line 498, <PDB>
> line 2117.

Please update to the latest version of AmberTools. It is possible that
this problem has been fixed in the 8 years since Amber 9 was released.

HTH,
Jason 

-- 
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Mon Jun 02 2014 - 05:30:05 PDT
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