Hi Sir,
Recently I use the Ambertools12 to protonate the N3 of the base Cytosine62 of the nucleic, I find the model of pdb at the AmberTools12/amber12/dat/leap/prep/protonated_nucleic/RC+.pdb. but I do not realize how can I call the model to add the hydrogen according the RC+.pdb.
I will deeply appreciate if you would like to tell me the solution.
The PDB as follows.
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- application/octet-stream attachment: 3NKB5.pdb
Received on Tue May 27 2014 - 00:30:02 PDT
