Dear Amber Users!
I've faced with the problem during compilation of amber tools-14 on one of
my debian machine (I've do such task both from regular and root user)
export AMBERHOME=/home/own/amber14/
./configure gnu
source amber.sh
make install
results in the
make[2]: Leaving directory `/home/own/amber14/AmberTools/src/rism'
(cd nab && make install )
make[2]: Entering directory `/home/own/amber14/AmberTools/src/nab'
gcc -DCC='"gcc"' -DCPP='"ucpp -l"' -DFLIBS='"-lsff -lpbsa -lrism -lfftw3
-larpack -llapack -lblas -lnetcdf -lgfortran -w "' \
-DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ
-DHASGZ -DHASBZ2 \
-o /home/own/amber14/bin/nab nab.c
/home/own/amber14/bin/nab -c allatom_to_dna3.nab
AMBERHOME is not set!
make[2]: *** [allatom_to_dna3.o] Error 1
make[2]: Leaving directory `/home/own/amber14/AmberTools/src/nab'
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/home/own/amber14/AmberTools/src'
Also I've defined AMBERHOME In .bashrc and checked it
own.arrakis ~ $ cd $AMBERHOME
own.arrakis ~/amber14
How it could be fixed?
James
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Received on Tue May 06 2014 - 00:30:03 PDT
