Re: [AMBER] FW: making test not successful in ambertool14

From: Mahendra B Thapa <thapamb.mail.uc.edu>
Date: Fri, 18 Apr 2014 08:59:15 -0400

Dear Dr. David and Dr.Brian

>From echo $AMBERHOME , the result is /home/mahendra/amber14/
and
>From echo $LD_LIBRARY_PATH, the result is /usr/lib64/alliance/lib

When I repeated these steps, then the test *succeeded*; so the problem
might be in my environment.
1] source /home/my_name/amber14/amber.sh
2] make install
3] make test

Thank you for help,
Mahendra Thapa


On Thu, Apr 17, 2014 at 12:44 PM, Thapa, Mahendra (thapamb) <
thapamb.mail.uc.edu> wrote:

>
>
>
> ________________________________________
> From: David A Case
> Sent: Thursday, April 17, 2014 10:44:27 AM (UTC-06:00) Central America
> To: AMBER Mailing List
> Subject: Re: [AMBER] making test not successful in ambertool14
>
> On Thu, Apr 17, 2014, Mahendra B Thapa wrote:
> >
> > I installed ambertool14 following manual. Everything looked fine
> [command
> > like cpptraj worked fine] except the message
> > ''We recommend this be added to your shell resource file (e.g., ~/.bashrc
> > or ~/.cshrc). Not running tests until this is fixed" when I issued the
> > command
> > make test [page 22 of the manual]
> >
> > But, I have already added the following in the .bashrc as I use bash
> shell:
> > export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$AMBERHOME/lib
> >
>
> Please report the results of the following commands:
>
> echo $AMBERHOME
> echo $LD_LIBRARY_PATH
>
> The "test_check.sh" script (in $AMBERHOME/AmberTools/test) is just
> comparing
> these two variables. But we need to find out whether the problem is with
> your environment, or whether the problem might be with the way the test in
> being made by Amber.
>
> ...thx...dac
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Apr 18 2014 - 06:30:08 PDT
Custom Search