Re: [AMBER] rdf averaging problem

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Tue, 15 Apr 2014 14:43:13 -0600

Hi,

This fix is in the version of cpptraj included with Amber 14, just
released today, so all you have to do is update.

-Dan

On Mon, Apr 14, 2014 at 9:35 PM, newamber list <newamberlist.gmail.com> wrote:
> Hi Daniel
>
> Thanks for considering this. I have some tedious long analysis to do with
> intrdf. It would be much useful if you can let us know when this bugfix is
> expected to be available. I could not figure out from Action_Radial.cpp
> file in src directory.
>
> Thanks again
> JIom
>
>
> On Mon, Apr 14, 2014 at 8:12 PM, Daniel Roe <daniel.r.roe.gmail.com> wrote:
>
>> Hi,
>>
>> This does appear to be a bug when the # of atoms in mask 2 > 1.
>> Dividing by # atoms in mask 2 should indeed fix it. Thanks for the
>> report!
>>
>> -Dan
>>
>> On Mon, Apr 14, 2014 at 10:58 AM, newamber list <newamberlist.gmail.com>
>> wrote:
>> > Hi,
>> >
>> > I am just wondering if this is correct way to fix this issue or not?
>> > (please see below)
>> >
>> > thanks
>> > _______________________________________________
>> > AMBER mailing list
>> > AMBER.ambermd.org
>> > http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>>
>> --
>> -------------------------
>> Daniel R. Roe, PhD
>> Department of Medicinal Chemistry
>> University of Utah
>> 30 South 2000 East, Room 201
>> Salt Lake City, UT 84112-5820
>> http://home.chpc.utah.edu/~cheatham/
>> (801) 587-9652
>> (801) 585-6208 (Fax)
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Tue Apr 15 2014 - 14:00:03 PDT
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