Hi,
I am trying to learn about the interaction of two small molecules with amber / antechamber. I succeded with your help to setup the system, but I would like to learn from other people experience about existing literature, if with Amber better, of what and how I should study a small molecule system.
The vast majority of the literarture of amber is on protein or protein ligand systems, that is the reason I am writting, can somebody direct me to ligand-ligand simulation in water or vacuum in which interaction energies are calculated?? or the system is studied in deep??
Any help will be highly appreciated,
Thanks a lot,
Fabian
_______________________________
Fabian Glaser, PhD
Head of the Structural Bioinformatics section
Bioinformatics Knowledge Unit - BKU
The Lorry I. Lokey Interdisciplinary
Center for Life Sciences and Engineering
Technion - Israel Institute of Technology
Haifa 32000, ISRAEL
fglaser.technion.ac.il
Tel: +972 4 8293701
Fax: +972 4 8225153
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Received on Mon Apr 07 2014 - 05:30:03 PDT
