On Thu, 2014-03-27 at 15:22 +0200, Fabian Glaser wrote:
> Thanks a lot,
>
> OK, could you please suggest a good alternative to parametrize two drug like molecules for MD on amber??
>
> Or it is the wrong tool?
Do each molecule separately. Antechamber is just used to derive charges
and determine atom types. You can combine molecules and residues within
tleap after each residue is defined.
HTH,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Thu Mar 27 2014 - 07:00:03 PDT
