[AMBER] problem in generating .prmtop and .inpcrd file using amber9

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From: Vijayalaxmi Sahoo <vlsahoo.rgp.gmail.com>
Date: Thu, 20 Mar 2014 16:17:32 +0530

I am currently working in centOs release 6.4 [final]. I am trying to
generate prmtop file (.inpcrd and .prmtop file) for bmim-Br system with
xaleap using amber9 .While generating the .inpcrd and .prmtop file the
errors coming is : Br does not have a type.

FATAL: Atom .R .A does not have a type.
FATAL: Atom .R .A does not have a type.
FATAL: Atom .R .A does not have a type.
Failed to generate parameters
Parameter file was not saved.

So, kindly tell me what is the atom type for Bromide and how to remove
these errors.

Thanks.
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Received on Thu Mar 20 2014 - 04:00:02 PDT