[AMBER] Question about Ambertools 1.5 installation

From: Wook Lee <tuf65152.temple.edu>
Date: Fri, 14 Mar 2014 12:53:04 -0400

Dear AMBER users,

I have a problem with Ambertools 1.5 installation.
I am using openSUSE 13.1, and it seemed fine until I configured it using
./configure gnu.
However, I got an error message below when I ran make install.

  Using AmberTools' python
Error importing cpinutil.py python modules! cpinutil will not work.
make[1]: *** [python] Error 1
make[1]: Leaving directory `/usr/local/amber11/AmberTools/src/etc'
make: *** [serial] Error 2

So, I configured again with ./configure -nopython gnu, and now I got
another error message below.

gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ \
         -o rdparm main.o rdparm.o dispatch.o help.o utility.o second.o
io.o trajectory.o netcdf_ptraj.o parallel_ptraj.o evec.o torsion.o
mask.o rms.o display.o interface.o energy.o experimental.o ptraj.o
actions.o analyze.o thermo.o pubfft.o cluster.o clusterLib.o
/usr/local/amber11//lib/libpdb.a /usr/local/amber11//lib/arpack.a
/usr/local/amber11//lib/lapack.a /usr/local/amber11//lib/blas.a
-lgfortran /usr/local/amber11//lib/libnetcdf.a -lm
gcc: error: /usr/local/amber11//lib/libnetcdf.a: No such file or directory
make[1]: *** [rdparm] Error 1
make[1]: Leaving directory `/usr/local/amber11/AmberTools/src/ptraj'
make: *** [serial] Error 2

Any help would be appreciated.

Cheers,

Wook

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Received on Fri Mar 14 2014 - 10:00:02 PDT
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