Dear AMBER User and Developer.
I read in MCPB manual, (MTKpp.pdf) in page 86,
"# Methyl terminating groups (Add these after all other residue have been
added)
addFragment terminal/CH3 bd /NAME/CLR/HD1-1/.CB. ag /NAME/CLR/HD1-1/.CG. tr
/NAME/CLR/HD1-1/.ND1 87.0
addFragment terminal/CH3 bd /NAME/CLR/AS2-2/.CB. ag /NAME/CLR/AS2-2/.CG. tr
/NAME/CLR/AS2-2/.OD2 170.0
addFragment terminal/CH3 bd /NAME/CLR/AS1-3/.CB. ag /NAME/CLR/AS1-3/.CG. tr
/NAME/CLR/AS1-3/.OD2 200.0
addFragment terminal/CH3 bd /NAME/CLR/GL1-4/.CB. ag /NAME/CLR/GL1-4/.CG. tr
/NAME/CLR/GL1-4/.CD. 288.0
addFragment terminal/CH3 bd /NAME/CLR/HD2-5/.CB. ag /NAME/CLR/HD2-5/.CG. tr
/NAME/CLR/HD2-5/.ND1 185.0"
I'd like to know where th number 87.0, 170.0, 200.0, 288.0, 185.0 come from
?
Thank you.
Setyanto Tri Wahyudi
Institut Teknologi Bandung
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Received on Tue Feb 25 2014 - 05:00:03 PST
