On Fri, Feb 21, 2014 at 7:17 PM, George Tzotzos <gtzotzos.me.com> wrote:
>
> IOError: [Errno 13] Permission denied:
> '.patches/AmberTools13_Unapplied_Patches/update.1'
> Automatic patching failed! Check the errors before re-configuring
>
You don't appear to have write permissions in the $AMBERHOME directory.
Fix that and it should work.
Good luck,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Fri Feb 21 2014 - 20:00:02 PST