The attached screenshot is self-explanatory. I’d appreciate any suggestions on how to get round this problem.
Thanks in advance
George
itvds-mb006:amber12 georgios.tzotzos$ ./configure gnu
Checking for updates...
Checking for available patches online. This may take a few seconds...
Available AmberTools 13 patches:
update.1, update.2, update.3, update.4, update.5, update.6, update.7, update.8, update.9, update.10,
update.11, update.12, update.13, update.14, update.15, update.16, update.17, update.18, update.19, update.20,
update.21, update.22, update.23
Available Amber 12 patches:
bugfix.1, bugfix.2, bugfix.3, bugfix.4, bugfix.5, bugfix.6, bugfix.7, bugfix.8, bugfix.9.bz2_, bugfix.10,
bugfix.11, bugfix.12, bugfix.13, bugfix.14, bugfix.15, bugfix.16, bugfix.17, bugfix.18.bz2, bugfix.19, bugfix.20,
bugfix.21
There are patches available. Do you want to apply them now? [y/n] (Recommended Y)
y
Preparing to apply updates... please wait.
Downloading updates for AmberTools 13
Downloading AmberTools 13/update.1 (14.25 KB)
Traceback (most recent call last):
File "./update_amber", line 23, in <module>
app.mainloop()
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 477, in mainloop
self.update()
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 43, in newfcn
fcn(self, *args, **kwargs)
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 308, in update
self._update_ambertools()
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 43, in newfcn
fcn(self, *args, **kwargs)
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 208, in _update_ambertools
last)
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 43, in newfcn
fcn(self, *args, **kwargs)
File "/Users/gtzotzos/Programs/amber12/updateutils/main.py", line 202, in _update_tree
remote.download_patches(first=localap.last()+1, last=last, apply_=True)
File "/Users/gtzotzos/Programs/amber12/updateutils/downloader.py", line 98, in new_fcn
return fcn(*args, **kwargs)
File "/Users/gtzotzos/Programs/amber12/updateutils/repos.py", line 270, in download_patches
manager.download_to(os.path.join(self.destination.location, pname))
File "/Users/gtzotzos/Programs/amber12/updateutils/downloader.py", line 150, in download_to
dest = open(destination, 'wb')
IOError: [Errno 13] Permission denied: '.patches/AmberTools13_Unapplied_Patches/update.1'
Automatic patching failed! Check the errors before re-configuring
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Received on Fri Feb 21 2014 - 16:30:02 PST
