Re: [AMBER] reg: the charges for methylated cytosine atoms

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 20 Feb 2014 08:25:48 -0500

On Thu, 2014-02-20 at 13:34 +0100, Filip Lankas wrote:
> Dear Satya,
>
> just look at the web site Jason suggests:
>
> http://www.pharmacy.manchester.ac.uk/bryce/amber/
>
>
> If you click on "Nucleic acids" there, then the first parameter set you
> see is for deoxy-5-methylcytosine (dmc), this may be what you want.

Oh man! I kept seeing "cysteine" in my head. Thank you for the
correction. As Filip points out the parameters (that he contributed)
are already there with the relevant citation, library, and frcmod files.

All the best,
Jason

-- 
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Thu Feb 20 2014 - 05:30:03 PST
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