Hi all,
I tried to re-install amber12 using openmp and the recent patches and the
build failed with the message:
```
make[1]: *** No rule to make target `openmp', needed by `install'. Stop.
```
I followed the instructions in manual: changed directory to AmberTools/src,
uncompressed openmpi-1.5.5.tar.bz2, run "./configure_openmpi gnu", changed
directory to $AMBERHOME, run "./configure -openmp gnu" and then "make
install".
It seems that the configure script set the vaiable "INSTALLTYPE" to "openmp"
which might be a problem as "openmp" is not recognised by the in the
$AMBERHOME/src/MakeFile.
Changing manually INSTALLTYPE to 'parallel' does not solve the problem as
the config.h is not recognised as of a parallel type because it does not
contain the DMPI keyword. Make returns the following error message
```
Error: config.h is not of type parallel!
Rerun ./configure and specify an MPI implementation.
```
Which I already did as I ran it with the -openmp option...
Could someone provide some help in compiling amber 12 with openmp using the
last pacthes.
Thank you
Quentin
--
-------------------------------------
Quentin Kaas, PhD
Institute for Molecular Bioscience IMB (L2N)
Laboratory of David Craik
The University of Queensland, St Lucia campus
Brisbane 4072, Queensland, Australia
Tel: +61 7 3346 2021
-------------------------------------
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Feb 17 2014 - 21:30:03 PST
