Re: [AMBER] amber parameter for S2P (phosphoserine)

From: Jonathan Sheehan <jonathan.sheehan.gmail.com>
Date: Tue, 24 Dec 2013 13:20:35 -0600

On Tue, Dec 24, 2013 at 2:32 AM, <sunita.tifrh.res.in> wrote:
> How could I change one serine residue of my
> protein to phosphoserine?
>
> Is there any easy way to do so?

Yes, edit the pdb file: change SER to SEP for the atoms in that
residue. LEaP will add the missing phosphate atoms for you.

Look at http://archive.ambermd.org/201308/0074.html

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Received on Tue Dec 24 2013 - 11:30:02 PST
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