Re: [AMBER] cpptraj can not pass empty trajectory entry which is ok for ptraj

From: Daniel Roe <>
Date: Fri, 20 Dec 2013 10:39:51 -0700


On Fri, Dec 20, 2013 at 9:52 AM, Asaminew Haile <> wrote:

> with this input ptraj works fine by giving the error "Could not process
> trajectory empty.netcdf" but cpptraj is not willing to pass the empty
> trajectory and gives error message

This behavior has been changed in cpptraj to prevent potentially bad input
from going unnoticed. As Rodrigo said, specifying 'noexitonerror' will tell
cpptraj to try and ignore such problems. Let me know if this doesn't work
for you.


Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Fri Dec 20 2013 - 10:00:02 PST
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