Hi,
Try using the '-bres' option of ambpdb.
-Dan
On Sun, Dec 8, 2013 at 8:22 PM, 闫玉娜 <hiyanyuna.gmail.com> wrote:
> Hi all,
> I have used amber to run a md .Now I want to use HBPLUS to analyze the
> result produced by amber.However ,HBPLUS can only identify the Brookhaven
> files .I have checked the amber pdb and the Brookhaven formated pdb,and
> find some difference. What can I do to change the amber formated pdb to
> Brookhaven formated pdb strictly ? Thank you very much .
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>
--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Sun Dec 08 2013 - 20:00:03 PST
