[AMBER] Parmed.py script generates additional dihedral terms

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From: Meekyum Olivia Kim <olivijuly.gmail.com>
Date: Tue, 5 Nov 2013 10:10:53 -0800

Hi All,

I was using Jason Swail's parmed.py scripts to extract parameters from topology files, using "writeFrcmod" command, and noticed that the script gave me additional dihedral terms that are different from AMBER parameters. Other bond, angle, improper, and nonbonded terms were fine though. Would anyone be able to explain this?

Thanks,
Olivia
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Received on Tue Nov 05 2013 - 10:30:03 PST