On Tue, Oct 29, 2013 at 4:39 PM, Concha, Monica
<Monica.Concha.ars.usda.gov>wrote:
> Jason M. Swails,
> Thank you for your quick answer!
> How do I accomplish that?
>
Well since you already added that directory to your path, just use "sander"
instead of $AMBERHOME/bin/sander.
> Thanks again!
>
>
> Monica C. Concha
> Physical Science Technician
> Cotton Structure and Quality Research
> Southern Regional Research Center
> 1100 Robert E. Lee Blvd.
> New Orleans, LA 70124
> monica.concha.ars.usda.gov
> phone: 504-286-4252
>
> -----Original Message-----
> From: Jason Swails [mailto:jason.swails.gmail.com]
> Sent: Tuesday, October 29, 2013 3:20 PM
> To: AMBER Mailing List
> Subject: Re: [AMBER] Sander error
>
> On Tue, Oct 29, 2013 at 4:09 PM, Concha, Monica
> <Monica.Concha.ars.usda.gov>wrote:
>
> > Hi,
> >
> > I recently installed AmberTools13 for the first time. However,
> > when I try to run sander I find that it is not in the amber12/bin
> > folder and I get the error message that amber12/bin/sander does not
> > exist. Does anyone know what am I doing wrong?
> >
>
> sander is part of Amber 12. If you do not have an Amber 12 license then
> sander 12 will not be built.
>
> As you mentioned, you do have Amber 10, so you will need to use sander
> from /home/glenn/amber10_distribution/amber10/bin instead.
>
> HTH,
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Tue Oct 29 2013 - 14:00:04 PDT
