Re: [AMBER] AMBERTOOLS13 test error: 01_Generalized_Born and, 03_Alanine_Scanning (Jason Swails)

From: marco.molinari <m.molinari.bath.ac.uk>
Date: Fri, 25 Oct 2013 13:42:27 +0100

Dear Jason,
That worked perfectly. Thank you.
Best wishes,
Marco

On 24/10/2013 20:00, amber-request.ambermd.org wrote:
> On Thu, Oct 24, 2013 at 6:55 AM, marco.molinari<m.molinari.bath.ac.uk>wrote:
>
>> >Good Morning,
>> >
>> >I am new to AMBERTOOLS and I just installed the latest version of
>> >AMBERTOOLS (AmberTools13).
>> >I compiled only AMBERTOOLS13 without problems. However 2 tests
>> >(01_Generalized_Born and 03_Alanine_Scanning) resulted in an error.
>> >
>> >Hereafter you will find part of the *.log and the mmpbsa.out for
>> >03_Alanine_Scanning (the problem seems to be the same for
>> >01_Generalized_Born).
>> >
>> >Any suggestions would be appreciated.
>> >
> Thanks for the report! I have fixed this issue. Please update your
> AmberTools installation. (If you just updated, you can save some time by
> running the commands:
>
> cd $AMBERHOME && ./update_amber --update
> make -C AmberTools/src/mmpbsa_py install
>
> ). Then try again. It should work.
>
> Thanks again,
> Jason
>
> -- Jason M. Swails BioMaPS, Rutgers University Postdoctoral Researcher

-- 
********************************************
Marco Molinari
Research Officer
Department of Chemistry
University of Bath
Claverton Down
Bath BA2 7AY
United Kingdom
Email: m.molinari.bath.ac.uk
Telephone: 0044 (0)1225 386523
Office 1.19, Building 1S
********************************************
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Received on Fri Oct 25 2013 - 06:00:04 PDT
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